This work is licensed under a Creative Commons Attribution 4.0 International License.
PTNr1 (42-66)
General Information
DCTPep ID DCTPep03705
Peptide Name PTNr1 (42-66)
Sequence KRCKNKMEGDDVAVSGRGARKAAKK
Sequence Length 25
UniProt ID Not available
PubChem CID Not available
Origin Synthetic
Type Synthetic peptide
Classification
Cancer therapy related peptides
Activity Information
Hemolytic Activity Not available
Normal (non-cancerous) Cytotoxicity Not available
Target Not available
Affinity Not available
Mechanism Not available
Structure Information
PDB ID Not available
Predicted Structure Not available
(Please note that there is the predicted structure, predicted by AlphaFold)
Helicity Not available
Linear/Cyclic Linear
Disulfide/Other Bond Not available
N-terminal Modification Free
C-terminal Modification Free
Other Modification None
Chiral L
Physicochemical Information
Formula C110H199N41O34S2
Absent amino acids FHILPQTWY
Theoretical pI 10.30
Acidic residues 3
Basic residues 9
Polar residues 6
Molecular weight (Average) 2704.16
Molecular weight (Monoisotopic) 2702.45
Common amino acids K
Net charge 6
Instability index (II) 38.36
Aliphatic index 39.20
Grand average of hydropathicity (GRAVY) -1.316
Half Life
1.3 hours (mammalian reticulocytes, in vitro).
3 min (yeast, in vivo).
3 min (Escherichia coli, in vivo).
Extinction coefficients
Ext. coefficient 0
Abs 0.1% (=1 g/l) 0.000, assuming all pairs of Cys residues form cystines
Ext. coefficient 0
Abs 0.1% (=1 g/l) 0.000, assuming all Cys residues are reduced
Amino acid distribution
Literature Information
Literature 1
Pubmed ID 30096337
Title Identification and Characterization of Novel Antimicrobial Peptide from Hippocampus comes by In Silico and Experimental Studies
Doi Not available
Year 2018
Patent
Patent ID Not available
Patent Title Not available
Other Iinformation Not available
Other Published ID Not available
External Code
DBAASP ID 11532
This work is licensed under a Creative Commons Attribution 4.0 International License.