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Flower-specific gamma-thionin, ZmD32
General Information
DCTPep ID DCTPep03821
Peptide Name Flower-specific gamma-thionin, ZmD32
Sequence RTCQSQSHRFRGPCLRRSNCANVCRTEGFPGGRCRGFRRRCFCTTHC
Sequence Length 47
UniProt ID B6SJ49
PubChem CID Not available
Origin Plantae
Type Native peptide
Classification
Cancer therapy related peptides
Activity Information
Hemolytic Activity Not available
Normal (non-cancerous) Cytotoxicity Not available
Target Not available
Affinity Not available
Mechanism Not available
Structure Information
PDB ID 6DMZ
Predicted Structure Not available
(Please note that there is the predicted structure, predicted by AlphaFold)
Helicity Not available
Linear/Cyclic Linear
Disulfide/Other Bond Not available
N-terminal Modification Free
C-terminal Modification Free
Other Modification None
Chiral L
Physicochemical Information
Formula C220H356N88O61S8
Absent amino acids DIKMWY
Theoretical pI 11.03
Acidic residues 1
Basic residues 13
Polar residues 22
Molecular weight (Average) 5466.28
Molecular weight (Monoisotopic) 5462.52
Common amino acids R
Net charge 12
Instability index (II) 97.01
Aliphatic index 16.60
Grand average of hydropathicity (GRAVY) -0.911
Half Life
1 hours (mammalian reticulocytes, in vitro).
2 min (yeast, in vivo).
2 min (Escherichia coli, in vivo).
Extinction coefficients
Ext. coefficient 500
Abs 0.1% (=1 g/l) 0.091, assuming all pairs of Cys residues form cystines
Ext. coefficient 0
Abs 0.1% (=1 g/l) 0.000, assuming all Cys residues are reduced
Amino acid distribution
Literature Information
Literature 1
Pubmed ID 31031739
Title Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32
Doi Not available
Year 2019
Patent
Patent ID Not available
Patent Title Not available
Other Iinformation Not available
Other Published ID Not available
External Code
DBAASP ID 13150
This work is licensed under a Creative Commons Attribution 4.0 International License.